The PPI-PS method consists of a representation of each protein sequence by a vector of pairwise similarities against large subsequences of amino acids created by a shifting window which passes over concatenated protein training sequences.
Nazar Zaki , Bioinformatics Laboratory, UAE University.
- Windows with cygwin
:: MORE INFORMATION
BMC Bioinformatics. 2009 May 17;10:150. doi: 10.1186/1471-2105-10-150.
Protein-protein interaction based on pairwise similarity.
Zaki N, Lazarova-Molnar S, El-Hajj W, Campbell P.