Nov 202015
 

PONDEROSA-C/S 20151030

:: DESCRIPTION

PONDEROSA-C/S  is a successor of the PONDEROSA (Peak picking Of NOE Data Enabled by Restriction Of Shift Assignments) program, which utilizes information from prior assignments to automatically pick NOE peaks from 3D-NOESY (13C-edited and 15N-edited) spectra and uses the results as input for a series of AUDANA (Automated Database-Assisted NOE Assignment) or CYANA structure calculations with the goal of achieving a publishable quality solution structure.

::DEVELOPER

The National Magnetic Resonance Facility at Madison (NMRFAM)

:: SCREENSHOTS

Ponderosa

:: REQUIREMENTS

  • Windows/Linux/MacOsX

:: DOWNLOAD

PONDEROSA-C/S

:: MORE INFORMATION

Citation

Lee W, Stark JL, Markley JL. (2014)
PONDEROSA-C/S: Client-server based software package for automated protein 3D structure determination.
Journal of Biomolecular NMR 60(2-3):73-5

PONDEROSA, an automated 3D-NOESY peak picking program, enables automated protein structure determination.
Lee W, Kim JH, Westler WM, Markley JL.
Bioinformatics. 2011 Jun 15;27(12):1727-8. doi: 10.1093/bioinformatics/btr200.

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