Feb 202012
 

PolyPhy

:: DESCRIPTION

PolyPhy (Polytomy Identification In Microbial Phylogeny) is a stand-alone phylogeny construction with polytomy identification tool. PolyPhy first constructes a microbial phylogeny with calculating a composite distance based on the comparison of complete gene sets between two genomes using ComPhy. And then it identifies bifurcating polytomies using Bayesian Logistic Regression classification from it.

::DEVELOPER

Digital Biology Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • Java

:: DOWNLOAD

 PolyPhy

:: MORE INFORMATION

Citation

Guan N Lin, Chao Zhang and Dong Xu
Polytomy identification in microbial phylogenetic reconstruction
BMC Systems Biology 2011, 5(Suppl 3):S2

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