POCO / POCO 2nd – Discovery of Regulatory Patterns from Promoters

POCO / POCO 2nd

:: DESCRIPTION

POCO is tool to find over-represented, under-represented and distinctly represented regulatory patterns from either one or two sequence sets.

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POCO 2nd is a tool to discover over-represented, under-represented and distinctly represented potential cis-elements from either one or two sequence sets that are located in the vicinity of a pre-defined cis-element.

::DEVELOPER

Liisa Holm’s Bioinformatics Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C++ Compiler

:: DOWNLOAD

 POCO

:: MORE INFORMATION

Citation:

Kankainen,M. and Holm,L. (2005)
POCO: discovery of regulatory patterns from promoters of oppositely expressed gene sets.
Nucleic Acids Research, 33(Web Server issue), W427-431.

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