May 072014
 

PLIDA

:: DESCRIPTION

PLIDA is a new method of cross-platform normalization that uses topic models to summarize the expression patterns in each dataset before normalizing the topics learned from each dataset using per-gene multiplicative weights.

::DEVELOPER

Morris Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/MacOsX/Windows
  • MatLab

:: DOWNLOAD

 PLIDA

 :: MORE INFORMATION

Citation:

Bioinformatics. 2014 Apr 1;30(7):956-61. doi: 10.1093/bioinformatics/btt574. Epub 2013 Oct 11.
PLIDA: cross-platform gene expression normalization using perturbed topic models.
Deshwar AG1, Morris Q.

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