KegDraw 0.1.15 beta – Draw Compound & Glycan Structures

KegDraw 0.1.15 beta

:: DESCRIPTION

KegDraw is a java application for drawing compound and glycan structures with capabilities to search against the KEGG databases.

::DEVELOPER

Kanehisa Laboratories

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac /  Linux
  • Java

:: DOWNLOAD

KegDraw

:: MORE INFORMATION

Citation

Glycobiology. 2006 May;16(5):63R-70R. Epub 2005 Jul 13.
KEGG as a glycome informatics resource.
Hashimoto K, Goto S, Kawano S, Aoki-Kinoshita KF, Ueda N, Hamajima M, Kawasaki T, Kanehisa M.

pDRAW32 1.1.141 – DNA Analysis Software

pDRAW32 1.1.141

:: DESCRIPTION

pDRAW32 is a scientific software for the molecular biologist. Performs virtual DNA cloning, analyses DNA for restriction enzymes, homing enzymes and primer sites, dam and dcm methylation sites, finds and translates open reading frames. Calculates annealing temperatures for PCR. Generates DNA/plasmid plots, virtual agarose gel plots, XY-homology plots – and more!

::DEVELOPER

AcaClone Software

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

pDRAW32

:: MORE INFORMATION

Marvin 16.5.2.0 – Draw & Visualize Chemistry

Marvin 16.5.2.0

:: DESCRIPTION

Marvin is a collection of tools for drawing, displaying and characterizing chemical structures, substructures and reactions.

::DEVELOPER

ChemAxon Ltd.

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Linux / Mac OsX
  • Java

:: DOWNLOAD

Marvin

:: MORE INFORMATION

SnapGene Viewer 3.1.2 – Create, Browse, and Share richly Annotated DNA Sequence

 SnapGene Viewer 3.1.2

:: DESCRIPTION

SnapGene Viewer is revolutionary software that allows molecular biologists to create, browse, and share richly annotated DNA sequence files up to 1 Gb in length.

::DEVELOPER

Biotech LLC

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / MacOSX

:: DOWNLOAD

 SnapGene Viewer

:: MORE INFORMATION

ApE 2.0.49 – A Plasmid Editor

ApE 2.0.49

:: DESCRIPTION

ApE (A Plasmid Editor) is an integrated program for plasmid construction and visualization. It includes a sequence editor, a linear text map identifying sequence features such as restriction sites and ORFs, and a graphic view that highlights sites and features in your sequences. A program designed by a molecular biologist, for molecular biologists.

::DEVELOPER

M. Wayne Davis

:: SCREENSHOTS

:: REQUIREMENTS

  • MacOsX / Windows / Linux
  • Tcl/Tk

:: DOWNLOAD

ApE

:: MORE INFORMATION

BIOVIA Draw 4.2 – Chemical Structure Drawing Tool

BIOVIA Draw 4.2

:: DESCRIPTION

BIOVIA Draw enables scientists to draw and edit complex molecules, chemical reactions and biological sequences with ease, facilitating the collaborative searching, viewing, communicating, and archiving of scientific information.

::DEVELOPER

Accelrys

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows

:: DOWNLOAD

BIOVIA DrawADD-INS

:: MORE INFORMATION

Chem4Word 2.0.1.0 beta5 – Chemistry Add-in for Word

Chem4Word 2.0.1.0 beta5

:: DESCRIPTION

Chem4Word makes it easier to insert and modify chemical information, such as labels, formulas, and 2D depictions, within Microsoft Word. Additionally, it enables the creation of inline “chemical zones,” the rendering of print-ready visual depictions of chemical structures, and the ability to store and expose chemical information in a semantically rich manner.

:: DEVELOPER

Chem4Word Team

:: SCREENSHOTS

Chem4Word

:: REQUIREMENTS

  • Windows
  • Word

:: DOWNLOAD

 Chem4Word

:: MORE INFORMATION

PlasmaDNA 1.4.2 – PLAsmid MAnipulation program

PlasmaDNA 1.4.2

:: DESCRIPTION

PlasmaDNA is a new, free DNA analysis and manipulation software. It is simple to learn and to use, and contains multiple features designed to help with:

The design of a successful cloning strategy
The generation of the sequences of new clones
The archiving of the cloning strategy

::DEVELOPER

Alexandre Angers-Loustau, Ph.D.
+358 9 191 25142
Haartmaninkatu 8
alexandre.angers-loustau (at) helsinki.fi

:: SCREENSHOTS

:: REQUIREMENTS

  • Windows / Mac OsX

:: DOWNLOAD

PlasmaDNA

:: MORE INFORMATION

Citation:

Alexandre Angers-Loustau , Jeffrey Rainy and Kirmo Wartiovaara
PlasmaDNA: a free, cross-platform plasmid manipulation program for molecular biology laboratories
BMC Molecular Biology 2007, 8:77