Apr 032014
 

PISwap

:: DESCRIPTION

PISwap is a software for optimizing global pairwise alignments of protein interaction networks, based on a local optimization heuristic that has previously demonstrated its effectiveness for a variety of other intractable problems.

::DEVELOPER

Leonid Chindelevitch (leonidus at mit dot edu), Bonnie Berger‘s group at MIT.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/Linux/MacOsX
  • Python

:: DOWNLOAD

 PISwap

:: MORE INFORMATION

Citation:

Bioinformatics. 2013 Nov 1;29(21):2765-73. doi: 10.1093/bioinformatics/btt486
Optimizing a global alignment of protein interaction networks.
Chindelevitch L, Ma CY, Liao CS, Berger B.

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