Jul 122014
 

PIPmiR 1.1

:: DESCRIPTION

PIPmiR is an algorithm to identify novel plant miRNA genes from a combination of deep sequencing data and genomic features.

::DEVELOPER

Uwe Ohler’s Research Group

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ Mac OsX/ Windows
  • Java
  • RNAFold

:: DOWNLOAD

  PIPmiR

:: MORE INFORMATION

Citation

Genome Res. 2012 Jan;22(1):163-76. doi: 10.1101/gr.123547.111. Epub 2011 Sep 22.
High-resolution experimental and computational profiling of tissue-specific known and novel miRNAs in Arabidopsis.
Breakfield NW, Corcoran DL, Petricka JJ, Shen J, Sae-Seaw J, Rubio-Somoza I, Weigel D, Ohler U, Benfey PN.

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