Oct 152015
 

piPipes 1.4.12

:: DESCRIPTION

piPipes is a coordinated set of pipelines to analyze piRNA (PIWI-interacting RNAs) and transposon-derived RNAs from a variety of high-throughput sequencing libraries, including small RNA, RNA, degradome or 7-methyl guanosine cap analysis of gene expression (CAGE), chromatin immunoprecipitation (ChIP) and genomic DNA-seq.

::DEVELOPER

the Zamore Lab and ZLab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • R
  • C++ Compiler

:: DOWNLOAD

 piPipes

:: MORE INFORMATION

Citation

piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing.
Han BW, Wang W, Zamore PD, Weng Z.
Bioinformatics. 2014 Oct 17. pii: btu647.

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