Jun 182014
 

Pipasic 20140121

:: DESCRIPTION

Pipasic (peptide intensity-weighted proteome abundance similarity correction) is a tool which corrects identification and spectral counting based quantification results using peptide similarity estimation and expression level weighting within a non-negative lasso framework.

::DEVELOPER

Bernhard Y. Renard

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/ WIndows/ MacOsX
  • Python
  • BioPython

:: DOWNLOAD

 Pipasic

:: MORE INFORMATION

Citation

Bioinformatics. 2014 Jun 15;30(12):i149-i156. doi: 10.1093/bioinformatics/btu267.
Pipasic: similarity and expression correction for strain-level identification and quantification in metaproteomics.
Penzlin A, Lindner MS, Doellinger J, Dabrowski PW, Nitsche A, Renard BY

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