Apr 242011
 

PicXAA 1.03 / PicXAA-R 1.0

:: DESCRIPTION

PicXAA is a probabilistic non-progressive alignment algorithm that finds protein multiple sequence alignments with maximum expected accuracy.

PicXAA-R is an extension of PicXAA for greedy structural alignment of NonCoding RNAs.

::DEVELOPER

Byung-Jun Yoon

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 PicXAA / PicXAA-R 

:: MORE INFORMATION

Citation

PicXAA: greedy probabilistic construction of maximum expected accuracy alignment of multiple sequences
Sayed Mohammad Ebrahim Sahraeian and Byung-Jun Yoon,
Nucleic Acids Research, 38(15):4917-4928, 2010.

PicXAA-R: efficient structural alignment of multiple RNA sequences using a greedy approach
Sayed Mohammad Ebrahim Sahraeian and Byung-Jun Yoon,
BMC Bioinformatics, 12(Suppl 1):S38, 2011

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