Jul 142013
 

pibase 1.4.7

:: DESCRIPTION

pibase (get Position Information at BASE position of interest) is a new tool for validating novel Single Nucleotide Variants (SNVs). It utilizes the details in the alignment files in order to identify the reproducible genotypes, hence distinguishing the true variants from artifacts. It can also be used to compare the nucleotide signals in different BAM files.

::DEVELOPER

Institut für Klinische Molekularbiologie

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Python

:: DOWNLOAD

  pibase

:: MORE INFORMATION

Citation

From next-generation sequencing alignments to accurate comparison and validation of single-nucleotide variants: the pibase software.
Forster M, et al.
Nucleic Acids Res. 2013 Jan 7;41(1):e16. doi: 10.1093/nar/gks836.

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