PhyML_Multi is a program built to compute phylogenetic trees in cases where events of homologous recombination have affected an alignment. It can simultaneously reconstruct phylogenetic trees and find recombination breakpoints.
- Linux / WIndows/MacOsX
- C++ Compiler
:: MORE INFORMATION
Boussau B, Guéguen L, Gouy M (2009).
“A Mixture Model and a Hidden Markov Model to Simultaneously Detect Recombination Breakpoints and Reconstruct Phylogenies“,
Evolutionary Bioinformatics, 2009, Jun 25;5:67-79.