PhiSpy is a novel algorithm for finding prophages in microbial genomes that combines similarity-based and composition-based strategies
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Nucleic Acids Res. 2012 Sep;40(16):e126. doi: 10.1093/nar/gks406. Epub 2012 May 14.
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategies.
Akhter S1, Aziz RK, Edwards RA.