PGAAS is prokaryotic genome assembly assistant system. The approach upon which PGAAS is based is to confirm the order of contigs and fill gaps between contigs through peptide links obtained by searching each contig end with BLASTX against protein database.
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PGAAS: a prokaryotic genome assembly assistant system.
Yu Z, Li T, Zhao J, Luo J.
Bioinformatics. 2002 May;18(5):661-5.