Jun 042014
 

PennSeq

:: DESCRIPTION

PennSeq is a statistical method that allows each isoform to have its own non-uniform read distribution.

::DEVELOPER

Yu Hu

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows
  • Perl

:: DOWNLOAD

 PennSeq

:: MORE INFORMATION

Citation

Nucleic Acids Res. 2014 Feb;42(3):e20. doi: 10.1093/nar/gkt1304. Epub 2013 Dec 20.
PennSeq: accurate isoform-specific gene expression quantification in RNA-Seq by modeling non-uniform read distribution.
Hu Y1, Liu Y, Mao X, Jia C, Ferguson JF, Xue C, Reilly MP, Li H, Li M.

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