Oct 082013
 

PECAN 0.8

:: DESCRIPTION

Pecan is a Java consistency based multiple sequence alignment program.

::DEVELOPER

Benedict Paten (benedict (AT) soe.ucsc.edu)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/ MacOsX
  • Java

:: DOWNLOAD

  PECAN

:: MORE INFORMATION

Citation

Genome Res. 2008 Nov;18(11):1814-28. doi: 10.1101/gr.076554.108. Epub 2008 Oct 10.
Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs.
Paten B, Herrero J, Beal K, Fitzgerald S, Birney E.

Bioinformatics. 2009 Feb 1;25(3):295-301.
Sequence progressive alignment, a framework for practical large-scale probabilistic consistency alignment.
Paten B, Herrero J, Beal K and Birney E.

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