Aug 162012
 

PDA 2.0

:: DESCRIPTION

PDA, Pipeline Diversity Analysis, is a collection of programs and modules, mainly written in Perl, that automatically can:

explore for potentially polymorphic sequences from a large source of heterogeneous DNA,
extract and sort them out by gene, species and extent of similarity,
align the different groups, and
estimate the genetic diversity in different functional regions.

::DEVELOPER

Sònia Casillas and Antonio Barbadilla. Genomics, Bioinformatics and Evolution Group.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Mac OsX / Windows
  • Perl

:: DOWNLOAD

  PDA

:: MORE INFORMATION

Citation

Sònia Casillas and Antonio Barbadilla (2006).
PDA v.2: improving the exploration and estimation of nucleotide polymorphism in large datasets of heterogeneous DNA.
Nucleic Acids Res. 34 (Web Server issue): W632-W634; doi: 10.1093/nar/gkl080

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