Jun 022014
 

PATTERNCNV 1.0

:: DESCRIPTION

PatternCNV is a versatile tool to facilitate CNV detection and interpretation from either Germline or Tumor/Normal pairs of Exome-seq samples. “Pattern” stands for common trends summarized from Exome-seq data.

::DEVELOPER

Bioinformatics Program, Division of Biomedical Statistics and Informatics, Mayo Clinic Research

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • R package
  • Perl

:: DOWNLOAD

  PATTERNCNV 

:: MORE INFORMATION

Citation

Bioinformatics. 2014 May 29. pii: btu363. [Epub ahead of print]
PatternCNV: a versatile tool for detecting copy number changes from exome sequencing data.
Wang C1, Evans JM2, Bhagwate AV2, Prodduturi N2, Sarangi V2, Middha M2, Sicotte H2, Vedell PT2, Hart SN2, Oliver GR2, Kocher JP2, Maurer MJ2, Novak AJ2, Slager SL2, Cerhan JR2, Asmann YW

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