Apr 242013
 

PathVisio-Validator

:: DESCRIPTION

The PathVisio-Validator plugin is aimed at producing standard biological pathway diagrams in PathVisio. The plugin makes it easier for the users to create pathways adhering to a standard (e.g. MIM and SBGN). This validation tool gives a detailed analysis as to which particular elements in the pathway are not diagrammed according to the standard. It basically helps the users of PathVisio to create pathways, which then could be shared among the biologists without any ambiguity. The standard against which PathVisio-Validator validates a pathway, is basically an MIM/SBGN based ruleset or a more generic GPML ruleset, in the form of “.sch/.xml” files

::DEVELOPER

PathVisio-Validator Team

:: SCREENSHOTS

:: REQUIREMENTS

:: DOWNLOAD

 PathVisio-Validator

:: MORE INFORMATION

Citation

Kumar Chandan, Martijn P. van Iersel, Mirit I. Aladjem, Kurt W. Kohn and Augustin Luna
PathVisio-Validator: A Rule-based Validation Plugin for Graphical Pathway Notations
Bioinformatics (2011)doi: 10.1093/bioinformatics/btr694

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