Nov 052014
 

Patch-Surfer 2.0

:: DESCRIPTION

Patch-Surfer is a method used to predict the binding ligand for a protein. The method used the 3 Dimensional Zernike Descriptor (3DZD) and Approximate Patch Position (APP) to describe the features of different patches of the protein pocket. Then retrieve similar pockets in the pocket database based on the similarity of 3DZD and APP between patches of different pockets, so that to predict the binding ligand.

::DEVELOPER

Kihara Bioinformatics Laboratory

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Web browser

:: DOWNLOAD

 NO

:: MORE INFORMATION

Citation

Large-scale binding ligand prediction by improved patch-based method Patch-Surfer2.0.
Zhu X, Xiong Y, Kihara D.
Bioinformatics. 2014 Oct 29. pii: btu724.

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