Parat 0.9.1 – Estimates Site Specific Substitution Rates from a set of DNA sequences

Parat 0.9.1

:: DESCRIPTION

parat estimates site specific substitution rates from a set of DNA sequences. The rates and the phylogenetic tree relating the sequences are estimated in an iterative maximum likelihood procedure, whereby the likelihood of the inferred tree increases at each iteration step until it converges.

::DEVELOPER

 the Center of Integrative Bioinformatics Vienna (CIBIV) headed by Arndt von Haeseler.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 parat

:: MORE INFORMATION

Citation:

S. Meyer and A. von Haeseler (2003)
Identifying site specific substitution rates.
Mol. Biol. Evol., 20, 182-189.

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