Palmpred utilizes one of the machine learning algorithm called Support Vector Machine for predicting cysteine-palmitoylation sites in proteins. It creates PSI-BLAST position-specific sequence profiles [PSSM] for each residue of protein sequence against NR90 database which is incorporated into Support Vector Machine for classification.
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PLoS One. 2014 Feb 19;9(2):e89246. doi: 10.1371/journal.pone.0089246. eCollection 2014.
PalmPred: an SVM based palmitoylation prediction method using sequence profile information.
Kumari B, Kumar R, Kumar M