Oct 082013
 

Ortheus 0.5

:: DESCRIPTION

Ortheus is a probabilistic method for the inference of ancestor (aka tree) alignments.It is primarily aimed at refining an initial (large-scale) genomic multiple-sequence alignment to create a multiple sequence ancestor alignment.

::DEVELOPER

Benedict Paten (benedict (AT) soe.ucsc.edu)

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Windows/ Linux/ MacOsX
  • Python
  • C Compiler

:: DOWNLOAD

   Ortheus

:: MORE INFORMATION

Citation

Genome Res. 2008 Nov;18(11):1814-28. doi: 10.1101/gr.076554.108. Epub 2008 Oct 10.
Enredo and Pecan: genome-wide mammalian consistency-based multiple alignment with paralogs.
Paten B, Herrero J, Beal K, Fitzgerald S, Birney E.

75 views

Sorry, the comment form is closed at this time.