NUCPLOT is a program that automatically generates schematic 2D representations of protein-nucleic acid interactions. The input is a standard PDB file and the output is a colour or black-and-white PostScript file which gives a simple, at-a-glance representation of the hydrogen bonds and hydrophobic contacts between proteins and nucleic acids.
:: MORE INFORMATION
Luscombe N M, Laskowski R A, Thornton J M. (1997).
NUCPLOT: a program to generate schematic diagams of protein-DNA interactions.
Nucleic Acids Research, 25, 4940-4945.