NucImport is a protein sequence and interaction prediction service designed to determine the nuclear transport of proteins in mouse and yeast. NucImport uses Bayesian networks, recognizes NLSs, links interactions to localization signals and incorporates sequence similarity. NucImport accepts amino acid sequences from user, presented in the FASTA format, and determines the probability of nuclear import as well as the location of nuclear localization signal in the query protein.
Institute for Molecular Bioscience, The University of Queensland
- Windows / Mac
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Bioinformatics. 2011 May 1;27(9):1239-46. Epub 2011 Mar 3.
A probabilistic model of nuclear import of proteins.
Mehdi AM, Sehgal MS, Kobe B, Bailey TL, Bodén M.