The NSITE: , NSITEH: and NSITEM: programs perform searches for statistically significant (non-random) motifs of known human, animal and plant one-box and composite REs in a single genomic sequence, in a pair of aligned homologous sequences and in a set of functionally related sequences, respectively.
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Nsite, NsiteH and NsiteM Computer Tools for Studying Tran-scription Regulatory Elements.
Shahmuradov IA, Solovyev VV.
Bioinformatics. 2015 Jul 2. pii: btv404