NgsAdmix 20130625 / FastNGSadmixPCA
NGSadmix is a very nice tool for finding admixture proportions from NGS data. It is based on genotype likelihoods.
FastNGSadmixPCA is a very fast tool for finding admixture proportions from NGS data of a single individual to incorporate into OCA of NGS data. It is based on genotype likelihoods.
- C++ Compiler / R
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Genetics. 2013 Nov;195(3):693-702. doi: 10.1534/genetics.113.154138. Epub 2013 Sep 11.
Estimating individual admixture proportions from next generation sequencing data.
Skotte L1, Korneliussen TS, Albrechtsen A.