ngs_backbone is a bioinformatic application created to work on sequence analysis by using NGS (Next Generation Sequencing) and sanger sequences. It is capable of cleaning reads, do de novo assembly or mapping against a reference and annotate SNPs, SSRs, ORFs, GO terms and sequence descriptions.
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BMC Genomics. 2011 Jun 2;12:285. doi: 10.1186/1471-2164-12-285.
ngs_backbone: a pipeline for read cleaning, mapping and SNP calling using next generation sequence.
Blanca JM, Pascual L, Ziarsolo P, Nuez F, Cañizares J.