Aug 222013
 

Multiz / TBA 20090121

:: DESCRIPTION

TBA (Threaded Blockset Aligner) is a computer program which builds a threaded blockset under the assumption that all matching segments occur in the same order and orientation in the given sequences; inversions and duplications are not addressed.

To perform the dynamic-programming alignment step, TBA runs a stand-alone program called MULTIZ, which can be used to align highly rearranged or incompletely sequenced genomes.

::DEVELOPER

Miller Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Compiler

:: DOWNLOAD

 Multiz / TBA

:: MORE INFORMATION

Citation

Genome Res. 2004 Apr;14(4):708-15.
Aligning multiple genomic sequences with the threaded blockset aligner.
Blanchette M, Kent WJ, Riemer C, Elnitski L, Smit AF, Roskin KM, Baertsch R, Rosenbloom K, Clawson H, Green ED, Haussler D, Miller W.

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