MultiTypeTree is a BEAST 2 package for performing phylogenetic inference under models incorporating some form of population structure. It implements a “multi-type” tree object, representing a phylogenetic tree with every time on each edge associated with one of a finite number of discrete types. These types often represent locations, but can in principle represent any well-defined sub-population
- Windows / Linux / MacOS
- BEAST 2
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Bioinformatics. 2014 Apr 20.
Efficient Bayesian inference under the structured coalescent.
Vaughan TG1, Kühnert D, Popinga A, Welch D, Drummond AJ.