MTDIS (mitochondrial DNA distance analysis program) was initially written to calculate genetic distances between populations for restriction site data obtained from single copy DNA sequences (eg. mtDNA). The present version of MTDIS will also calculate inter-population genetic distances for DNA sequence data obtained from single copy DNA.
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Danzmann, R.G. 1998.
MTDIS: A computer program to estimate genetic distances among populations based upon variation in single copy DNA.
J. Hered. 89: 283-284.