Sep 192011
 

MotifRegressor

:: DESCRIPTION

MOTIFREGRESSOR for discovering sequence motifs upstream of genes that undergo expression changes in a given condition. The method combines the advantages of matrix-based motif finding and oligomer motif-expression regression analysis, resulting in high sensitivity and specificity. MOTIF REGRESSOR is particularly effective in discovering expression-mediating motifs of medium to long width with multiple degenerate positions.

::DEVELOPER

Xiaole Shirley Liu Lab , Erin Marie Conlon 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

:: DOWNLOAD

 MotifRegressor

:: MORE INFORMATION

Citation:

Conlon, E.M., Liu, X.S., Lieb, J.D., Liu, J.S. (2003)
Integrating regulatory motif discovery and genome-wide expression analysis.
Proceedings of the National Academy of Sciences USA, 100, 3339-3344.

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