Sep 292011
 

motifGPU 1.0

:: DESCRIPTION

motifGPU is a library that uses GPUs to accelerate motif search. Extensive performance comparison studies on two different graphics cards from NVIDIA, (GeForce) GTX 260 and GeForce GTX 480, showed that commonly-used model-based motif scan procedures can be dramatically accelerated using our library. De novo motif discovery can also benefit from our GPU-accelerated tools.

::DEVELOPER

Steve Qin @ the Center for Statistical Genetics

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  motifGPU

:: MORE INFORMATION

For bug report, questions or comments, please contact Pooya Zandevakili (zandv@umich.edu).

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