Apr 152014
 

MOCAT 1.3

:: DESCRIPTION

MOCAT (Metagenomics Analysis Toolkit) is a package for analyzing metagenomics datasets. Currently MOCAT supports Illumina single- and paired-end reads in raw FastQ format. Using MOCAT you can, for example, generate taxonomic profiles of, and assemble, metagenomes.

::DEVELOPER

Jens Roat Kultima & Shinichi Sunagawa (Bork GroupEMBL) in collaboration with BGI.

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • Perl

:: DOWNLOAD

 MOCAT

:: MORE INFORMATION

Citation:

PLoS One. 2012;7(10):e47656. doi: 10.1371/journal.pone.0047656. Epub 2012 Oct 17.
MOCAT: a metagenomics assembly and gene prediction toolkit.
Kultima JR, Sunagawa S, Li J, Chen W, Chen H, Mende DR, Arumugam M, Pan Q, Liu B, Qin J, Wang J, Bork P.

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