mmeta is a program to produce and to align the TF-maps of multiple promoter regions. mmeta is very powerful to characterize promoter regions from multiple orthologous genes, or from co-regulated genes in microarrays, as it reduces the signal/noise ratio in a very significant manner, still detecting the real functional sites.
:: MORE INFORMATION
E. Blanco,R. Guigó and X. Messeguer
“Multiple Non-Collinear Transcription Factor Map Alignment of Promoter Regions”
BMC Bioinformatics 8:138 (2007).