Jun 162015
 

MMDiff 1.8.0

:: DESCRIPTION

MMDiff is a software package to detect statistically significant difference between read enrichment profiles in different ChIP-Seq samples. It uses Kernel methods to quantify shape changes in signal profiles and can be applied for differential peak calling.

::DEVELOPER

Gabriele Schweikert

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows/ MacOsX
  • R
  • BioConductor

:: DOWNLOAD

 MMDiff

:: MORE INFORMATION

Citation

BMC Genomics. 2013 Nov 24;14:826. doi: 10.1186/1471-2164-14-826.
MMDiff: quantitative testing for shape changes in ChIP-Seq data sets.
Schweikert G, Cseke B, Clouaire T, Bird A, Sanguinetti G.

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