MMAPPR is an analysis pipeline for mapping mutations using RNA-seq. It works without parental strain information, without the requirement of a pre-existing snp map of the organism, and without erroneous assumptions that recombination occurs at the same frequency across the genome.
- Linux / Windows/MacOsX
- R package
:: MORE INFORMATION
Hill, J. T., Demarest, B. L., Bisgrove, B. W., Gorsi, B., Su, Y.-C., & Yost, H. J. (2013).
MMAPPR: Mutation Mapping Analysis Pipeline for Pooled RNA-seq.
Genome Res. 2013 Apr;23(4):687-97.