MiRFinder is a high throughput and good performance computational pre-miRNA prediction tool. The tool was designed for genome-wise, pair-wise sequences from two related species. In our experiments, the MiRFinder has demontracted reasonably better sensitivity and speed comparing to similar tools.
Key Lab of Agricultural Animal Genetics, Breeding, and Reproduction of Ministry of Education, Huazhong Agricultural University
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BMC Bioinformatics. 2007 Sep 17;8:341.
MiRFinder: an improved approach and software implementation for genome-wide fast microRNA precursor scans.
Huang TH, Fan B, Rothschild MF, Hu ZL, Li K, Zhao SH.