MIP Scaffolder 0.6 – Scaffold Contigs Produced by Fragment Assemblers

MIP Scaffolder 0.6

:: DESCRIPTION

MIP Scaffolder is a program for scaffolding contigs produced by fragment assemblers using mate pair data such as those generated by ABI SOLiD or Illumina Genome Analyzer.

::DEVELOPER

Leena Salmela

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

  MIP Scaffolder

:: MORE INFORMATION

Citation:

Bioinformatics. 2011 Dec 1;27(23):3259-65. Epub 2011 Oct 13.
Fast scaffolding with small independent mixed integer programs.
Salmela L, Mäkinen V, Välimäki, N, Ylinen J, Ukkonen E.

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