MicroTar 0.9.6 – microRNA Target Prediction from RNA Duplexes

MicroTar 0.9.6

:: DESCRIPTION

MicroTar is a microRNA target prediction program based on mRNA sequence complementarity (3′-UTR seed matches) and RNA duplex energy prediction, assessing the impact of microRNA binding on complete mRNA molecules. It uses the RNAlib library from the Vienna RNA package.

Advertisement

::DEVELOPER

Tammi Lab

:: SCREENSHOTS

Command Line

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

MicroTar Serial version ; Parallel (MPI) version

:: MORE INFORMATION

Citation:

Thadani R, Tammi MT (2006).
MicroTar: predicting microRNA targets from RNA duplexes
BMC Bioinformatics 7:S20.

Leave a Reply

Your email address will not be published. Required fields are marked *

 

This site uses Akismet to reduce spam. Learn how your comment data is processed.