MicroTar is a microRNA target prediction program based on mRNA sequence complementarity (3′-UTR seed matches) and RNA duplex energy prediction, assessing the impact of microRNA binding on complete mRNA molecules. It uses the RNAlib library from the Vienna RNA package.
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Thadani R, Tammi MT (2006).
MicroTar: predicting microRNA targets from RNA duplexes
BMC Bioinformatics 7:S20.