Nov 292015
 

mfDCA

:: DESCRIPTION

Direct Coupling Analysis (DCA) is a statistical inference framework used to infer direct co-evolutionary couplings among residue pairs in  multiple sequence alignments. A recent formulation of DCA termed mean field DCA (mfDCA), provides the computational power to apply this tool in a high throughput manner to a number of protein and domain families.

::DEVELOPER

mfDCA Team

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / MacOsX
  • MatLab

:: DOWNLOAD

 mfDCA

:: MORE INFORMATION

Citation

Proc Natl Acad Sci U S A. 2011 Dec 6;108(49):E1293-301. doi: 10.1073/pnas.1111471108. Epub 2011 Nov 21.
Direct-coupling analysis of residue coevolution captures native contacts across many protein families.
Morcos F1, Pagnani A, Lunt B, Bertolino A, Marks DS, Sander C, Zecchina R, Onuchic JN, Hwa T, Weigt M.

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