MemeFinder – Prepare data for use by MEME

MemeFinder

:: DESCRIPTION

MemeFinder performs the evolutionary weighting and conservation masking steps of the SLiMFinder algorithm to prepare data for input to SLiMFinder.

::DEVELOPER

Shields Lab 

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux / Windows / Mac OsX
  • Python

:: DOWNLOAD

 MemeFinder

:: MORE INFORMATION

Citation:

Profile-based short linear protein motif discovery
Niall J Haslam and Denis C Shields
BMC Bioinformatics 2012, 13:104 doi:10.1186/1471-2105-13-104