May 292014
 

Meerkat 0.185

:: DESCRIPTION

Meerkat is designed to identify structure variations (SVs) from paired end high throughput sequencing data. It predicts SVs from discordant read pairs (pairs that mapped to reference genome in unexpected way).

::DEVELOPER

Peter Park’s lab at CBMI, Harvard Medical School

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux

:: DOWNLOAD

 Meerkat

:: MORE INFORMATION

Citation

Cell. 2013 May 9;153(4):919-29. doi: 10.1016/j.cell.2013.04.010.
Diverse mechanisms of somatic structural variations in human cancer genomes.
Yang L, Luquette LJ, Gehlenborg N, Xi R, Haseley PS, Hsieh CH, Zhang C, Ren X, Protopopov A, Chin L, Kucherlapati R, Lee C, Park PJ.

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