Medusa is a java standalone application for visualization and clustering analysis of biological networks in 2D. It is highly interactive and it supports weighted and multi-edged graphs where each edge between two bioentities can represent a different biological concept. Comparing to previous versions, it is currently enriched with a variety of layout and clustering methods for more intuitive visualizations. It is easy to integrate with web application since it is offered as an applet.
- Windows / Linux / Mac OsX
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Medusa: a simple tool for interaction graph analysis.
Hooper SD, Bork P
Bioinformatics. 2005 Dec 15; 21(24): 4432-3. Epub 2005 Sep 27; PubMed: 16188923.