Jun 122014
 

MATCHCLIPS 2

:: DESCRIPTION

MATCHCLIP is a program for identifying the breakpoints and CNVs based on the next generation sequence data using CIGAR strings.

::DEVELOPER

Hongzhe Li Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux
  • C Compiler

:: DOWNLOAD

 MATCHCLIP

:: MORE INFORMATION

Citation

Front Genet. 2013 Aug 16;4:157. doi: 10.3389/fgene.2013.00157. eCollection 2013.
MATCHCLIP: locate precise breakpoints for copy number variation using CIGAR string by matching soft clipped reads.
Wu Y1, Tian L, Pirastu M, Stambolian D, Li H.

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