Sep 082015
 

MAnorm

:: DESCRIPTION

MAnorm is a simple and effective method for quantitative comparison of ChIP-Seq data sets describing transcription factor binding sites and epigenetic modifications. The quantitative binding differences inferred by MAnorm showed strong correlation with both the changes in expression of target genes and the binding of cell type-specific regulators.

::DEVELOPER

Plant Bioinformatics and Functional Epigenomics Group, Guo-CHeng Yuan Lab

:: SCREENSHOTS

N/A

:: REQUIREMENTS

  • Linux/Windows/MacOsX
  • R package/Matlab

:: DOWNLOAD

 MAnorm

:: MORE INFORMATION

Citation

Shao Z, Zhang Y, Yuan GC., Orkin SH, Waxman DJ.
MAnorm: a robust model for quantitative comparison of ChIP-Seq data sets.
Genome Biology. 2012 Mar 16;13(3):R16.

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