MagicViewer 1.2.1 – Integrated Solution for Next-generation Sequencing Data Visualization

MagicViewer 1.2.1


MagicViewer is an integrated software to satisfy the impending need for deciphering the large-scale data generated from next-generation sequencing. MagicViewer provides a user-friendly environment in which large-scale short reads can be displayed in a zoomable interface under user-defined color scheme through an operating system-independent manner. Meanwhile, it also holds a versatile computational pipeline for genetic variation detection, filtration, annotation and visualization, providing details of search option, functional classification, subset selection, sequence association and primer design. In conclusion, MagicViewer is a sophisticated assembly visualization and genetic variation annotation tool for next-generation sequencing data, which can be widely used in a variety of sequencing-based researches, including genome re-sequencing and transcriptome studies.



Institute of Genomic Medicine/Zhejiang Provincial Key Laboratory of Medical Genetics, Wenzhou Medical College, Wenzhou



  • Linux / Windows / Mac OsX
  • Java





Hou H, Zhao F, Zhou L, Zhu E, Teng H, Li X, Bao Q, Wu J, Sun Z.
MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation.
Nucleic Acids Res. 2010 Jul;38(Web Server issue):W732-6. Epub 2010 May 5.

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