loopDloop is a tool for drawing RNA secondary structures in molecular biology. It will read files that include biosequence data with base pairing information. It will display graphical views of the sequences secondary molecular structure. Various options allow one to modify,adorn and edit the structure. Standard application functions to save,print, edit and manage preferences are included. This program will not estimate nor produce the base pairings needed for secondary structure. For that, other software such as RNAFOLD, MulFOLD, and multiple sequencealignment editors may be used.
Don Gilbert at Indiana University
- Windows / Linux / Mac OsX
:: MORE INFORMATION
Gilbert, D.G., 1996. loopDloop in Java, a Java application for visualizing RNA secondary structure. ftp://iubio.bio.indiana.edu/molbio/loopdloop/java/.