LOLA (LOgos Look Amazing) is a tool for generating sequence logos using Position Weight Matrix based protein profiles. LOLA allows you to generate custom sequence logos by setting parameters such as logo height, trim percentage, and residue colour scheme. You can also generate “logo trees” based on clustered protein profiles to analyze binding motif classes. Sequence logos and logo trees can be saved in various formats including PDF, PNG, and JPEG.
- Windows / Linux / MacOSX
:: MORE INFORMATION
Tonikian, R. et al.(2008)
A Specificity Map for the PDZ Domain Family.
PLOS Biology, 6, 9: 2043-2059.